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Protocols

Search for the protocol for your specific application. If you do not find a protocol that meets your needs, please contact our support team as we have many protocols in development and can customize one for your laboratory. 

Please note that the Nanotrap Magnetic Virus Particles are now renamed Nanotrap Microbiome A Particles

Manual Protocols

APP-043: RNA Extraction from Clinical Swab Samples

APP-036: Manual Nanotrap® Microbiome A; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-040: Manual Nanotrap® Microbiome A; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-042: Manual Nanotrap® A; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-064; Manual Nanotrap® A; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-065: Manual Nanotrap® A; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-080: Manual Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit

APP-081: Manual Nanotrap® Microbiome A and B Enviro Water Protocol using NucleoMag Kit

APP-082: Manual Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit

APP-083; Manual Nanotrap® Microbiome A Enviro Water Protocol using NucleoMag Kit

APP-084: Manual Nanotrap® Microbiome B Enviro Water Protocol using MagMAX Kit

APP-085: Manual Nanotrap® Microbiome B Enviro Water Protocol using NucleoMag Kit

APP-088: Nanotrap® Microbiome A 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-089: Nanotrap® Microbiome B 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-090: Nanotrap® Microbiome Combined 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-091: Nanotrap® Microbiome A 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-092: Nanotrap® Microbiome B 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-093: Nanotrap® Microbiome Combined 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-094: Nanotrap® Microbiome B; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-095: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-096: Nanotrap® Microbiome B; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-097: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-101: Nanotrap® Microbiome A 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-102: Nanotrap® Microbiome B 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-103: Nanotrap® Microbiome Combined 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-119: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-120: Nanotrap® Microbiome A; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-121: Nanotrap® Microbiome B; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-123: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-124: Nanotrap® Microbiome B; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-125: Nanotrap® Microbiome A; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-126: Nanotrap® Microbiome B; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-127: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-128: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-129: Nanotrap® Microbiome B; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-130: Nanotrap® Microbiome B; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-131: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-132: Nanotrap® Microbiome A; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-133: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-134: Nanotrap® Microbiome B; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-135: Nanotrap® Microbiome A; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-136: Nanotrap® Microbiome B; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-137: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

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Manual Protocols - All Kits
Automated Protocols

APP-035: Automated Nanotrap® Wastewater Protocol using QIAGEN MagAttract® Viral RNA Kit

APP-037: Automated Nanotrap® Wastewater Protocol using Promega Maxwell® HT Environmental TNA Kit

APP-039: Automated Nanotrap® Wastewater Protocol using IDEXX Water DNA/RNA Magnetic Bead Kit

APP-041: Automated Nanotrap® Wastewater Protocol using ZymoBIOMICS® MagBead DNA/RNA Kit

APP-074: Automated Nanotrap® Microbiome B Enviro Water Protocol using NucleoMag Kit

APP-075: Automated Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit

APP-076: Nanotrap® Microbiome Combined; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Apex

APP-077: Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit

APP-078: Automated Nanotrap® Microbiome A Enviro Water Protocol using NucleoMag Kit

APP-079: Automated Nanotrap® Microbiome B Enviro Water Protocol using MagMAX Kit

APP-104: Automated Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-105: Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-106: Nanotrap® Microbiome B 35mL Automated Protocol with MagMAX Kit and KingFisher Apex

APP-110: Nanotrap® Microbiome Combined; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-111: Nanotrap® Microbiome Combined; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-112: Nanotrap® Microbiome Combined; 35 mL Automated Protocol withNucleoMag® Kit and the KingFisher™ Flex

APP-113: Nanotrap® Microbiome A; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-114: Nanotrap® Microbiome A; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-115: Nanotrap® Microbiome B; 10 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-116: Nanotrap® Microbiome B; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-117: Nanotrap® Microbiome B; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-118: Nanotrap® Microbiome A; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-169: Continuous Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit_10 mL_Apex

APP-170: Continuous Automated Nanotrap® Microbiome B Enviro Water Protocol using MagMAX Kit_10 mL_Apex

Automated Protocols - All Kits
Protocols by Extraction Kit - New England BioLabs
Protocols by Extraction Kit

Thermo Fisher Scientific

AUTOMATED

APP-075: Automated Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit

APP-077: Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit

APP-104: Automated Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-105: Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-106: Nanotrap® Microbiome B 35mL Automated Protocol with MagMAX Kit and KingFisher Apex

APP-169: Continuous Automated Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit_10 mL_Apex

APP-170: Continuous Automated Nanotrap® Microbiome B Enviro Water Protocol using MagMAX Kit_10 mL_Apex

MANUAL

APP-080: Manual Nanotrap® Microbiome A and B Enviro Water Protocol using MagMAX Kit

APP-082: Manual Nanotrap® Microbiome A Enviro Water Protocol using MagMAX Kit

APP-084: Manual Nanotrap® Microbiome B Enviro Water Protocol using MagMAX Kit

APP-101: Nanotrap® Microbiome A 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-102: Nanotrap® Microbiome B 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-103: Nanotrap® Microbiome Combined 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

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MACHEREY-NAGEL 

AUTOMATED

APP-074: Automated Nanotrap Microbiome B Enviro Water Protocol using NucleoMag Kit

APP-076: Nanotrap® Microbiome Combined; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Apex

APP-078: Automated Nanotrap Microbiome A Enviro Water Protocol using NucleoMag Kit

APP-110: Nanotrap® Microbiome Combined; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-111: Nanotrap® Microbiome Combined; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-112: Nanotrap® Microbiome Combined; 35 mL Automated Protocol withNucleoMag® Kit and the KingFisher™ Flex

APP-113: Nanotrap® Microbiome A; 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-114: Nanotrap® Microbiome A; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-115: Nanotrap® Microbiome B; 10 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-116: Nanotrap® Microbiome B; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-117: Nanotrap® Microbiome B; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-118: Nanotrap® Microbiome A; 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

MANUAL

APP-081: Manual Nanotrap® Microbiome A and B Enviro Water Protocol using NucleoMag Kit

APP-083; Manual Nanotrap® Microbiome A Enviro Water Protocol using NucleoMag Kit

APP-085: Manual Nanotrap® Microbiome B Enviro Water Protocol using NucleoMag Kit

APP-119: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-120: Nanotrap® Microbiome A; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-121: Nanotrap® Microbiome B; 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

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QIAGEN

AUTOMATED

APP-035: Automated Nanotrap® Wastewater Protocol using QIAGEN MagAttract® Viral RNA Kit

MANUAL

APP-064; Manual Nanotrap® A; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-065: Manual Nanotrap® A; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-088: Nanotrap® Microbiome A 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-089: Nanotrap® Microbiome B 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-090: Nanotrap® Microbiome Combined 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-091: Nanotrap® Microbiome A 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-092: Nanotrap® Microbiome B 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-093: Nanotrap® Microbiome Combined 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-094: Nanotrap® Microbiome B; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-095: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-096: Nanotrap® Microbiome B; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-097: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

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PROMEGA 

AUTOMATED

APP-037: Automated Nanotrap® Wastewater Protocol using Promega Maxwell® HT Environmental TNA Kit

MANUAL

APP-036: Manual Nanotrap® Microbiome A; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-123: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-124: Nanotrap® Microbiome B; 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-125: Nanotrap® Microbiome A; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-126: Nanotrap® Microbiome B; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-127: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

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IDEXX 

AUTOMATED

APP-039: Automated Nanotrap® Wastewater Protocol using IDEXX Water DNA/RNA Magnetic Bead Kit

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ZymoBIOMICS 

AUTOMATED

APP-041: Automated Nanotrap® Wastewater Protocol using ZymoBIOMICS® MagBead DNA/RNA Kit

MANUAL

APP-040: Manual Nanotrap® Microbiome A; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-128: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-129: Nanotrap® Microbiome B; 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-130: Nanotrap® Microbiome B; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-131: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-132: Nanotrap® Microbiome A; 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

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New England BioLabs

MANUAL

APP-042: Manual Nanotrap® A; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-133: Nanotrap® Microbiome Combined; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-134: Nanotrap® Microbiome B; 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-135: Nanotrap® Microbiome A; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-136: Nanotrap® Microbiome B; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-137: Nanotrap® Microbiome Combined; 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

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Direct Extraction

APP-043: RNA Extraction from Clinical Swab Samples

Protocols by Extraction Kit - ThermoFisher
Protocols by Extraction Kit - MACHERY-NAGEL
Protocols by Extraction Kit - QIAGEN
Protocols by Extraction Kit - Promega
Protocols by Extraction Kit - IDEXX
Protocols by Extraction Kit - ZymoBIOMICS
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