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Manual Protocols

APP-043: RNA Extraction from Clinical Swab Samples

APP-036: Manual Nanotrap® Microbiome A Particles: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-040: Manual Nanotrap Microbiome A Particles: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-042: Manual NanotrapMicrobiome A Particles: 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-064; Manual Nanotrap Microbiome A Particles: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-065: Manual Nanotrap Microbiome A Particles: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-080: Manual Nanotrap Microbiome A Particles and Nanotrap® Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-081: Manual Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-082: Manual Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit

APP-083; Manual Nanotrap Microbiome A Particles: Enviro Water Protocol using NucleoMag Kit

APP-084: Manual Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-085: Manual Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-088: Nanotrap Microbiome A Particles: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-089: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-090: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-091: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-092: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-093: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-094: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-095: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-096: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-097: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-101: Nanotrap Microbiome A Particles: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-102: Nanotrap Microbiome B Particles: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-103: Nanotrap Microbiome Particles, Combined: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-119: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-120: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-121: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-123: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-124: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-125: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-126: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-127: Nanotrap Microbiome Particles, Combined35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-128: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-129: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-130: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-131: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-132: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-133: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-134: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-135: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-136: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit

APP-137: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with Monarch Total RNA MiniPrep Kit​​

Manual Protocols - All Kits

Automated Protocols

Automated Protocols - All Kits
Protocols by Extraction Kit - New England BioLabs

Protocols by Extraction Kit

Thermo Fisher Scientific
AUTOMATED

APP-075: Automated Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-077: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit

APP-104: Automated Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-105: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-106: Nanotrap® Microbiome B Particles: 35mL Automated Protocol with MagMAX Kit and KingFisher Apex

APP-169: Continuous Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit_10 mL_Apex

APP-170: Continuous Automated Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit_10 mL_Apex

 

MANUAL

APP-080: Manual Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-082: Manual Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit

APP-084: Manual Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-101: Nanotrap Microbiome A Particles: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-102: Nanotrap Microbiome B Particles: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

APP-103: Nanotrap Microbiome Particles, Combined: 35mL Manual Protocol with MagMAX Microbiome Ultra Nucleic Acid Isolation Kit

MACHEREY-NAGEL 

AUTOMATED

APP-074: Automated Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-076: Nanotrap Microbiome Particles, Combined: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Apex

APP-078: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using NucleoMag Kit

APP-110: Nanotrap Microbiome Particles, Combined: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-111: Nanotrap Microbiome Particles, Combined: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-112: Nanotrap Microbiome Particles, Combined: 35 mL Automated Protocol withNucleoMag® Kit and the KingFisher™ Flex

APP-113: Nanotrap Microbiome A Particles: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-114: Nanotrap Microbiome A Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-115: Nanotrap Microbiome B Particles: 10 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-116: Nanotrap Microbiome B Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-117: Nanotrap Microbiome B Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-118: Nanotrap Microbiome A Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

 

MANUAL

APP-081: Manual Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-083; Manual Nanotrap Microbiome A Particles: Enviro Water Protocol using NucleoMag Kit

APP-085: Manual Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-119: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-120: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

APP-121: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with NucleoMag® DNA/RNA Water Extraction Kit

QIAGEN
AUTOMATED

APP-035: Automated Nanotrap Wastewater Protocol using QIAGEN MagAttract® Viral RNA Kit

MANUAL

APP-064; Manual Nanotrap A Particles: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-065: Manual Nanotrap A Particles: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-088: Nanotrap Microbiome A Particles: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-089: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-090: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-091: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-092: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-093: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with AllPrep PowerViral DNA RNA Mini Kit

APP-094: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-095: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-096: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

APP-097: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with QIAamp Viral RNA Mini Kit

PROMEGA 
AUTOMATED

APP-037: Automated Nanotrap Wastewater Protocol using Promega Maxwell® HT Environmental TNA Kit

MANUAL

APP-036: Manual Nanotrap Microbiome A Particles: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-123: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-124: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-125: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-126: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

APP-127: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with Promega Maxwell® HT Environmental TNA Kit

IDEXX 
AUTOMATED

APP-039: Automated Nanotrap Wastewater Protocol using IDEXX Water DNA/RNA Magnetic Bead Kit

ZymoBIOMICS 
AUTOMATED

APP-041: Automated Nanotrap Wastewater Protocol using ZymoBIOMICS® MagBead DNA/RNA Kit

MANUAL

APP-040: Manual Nanotrap Microbiome A Particles: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-128: Nanotrap Microbiome Particles, Combined: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-129: Nanotrap Microbiome B Particles: 10 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-130: Nanotrap Microbiome B Particles: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-131: Nanotrap Microbiome Particles, Combined: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

APP-132: Nanotrap Microbiome A Particles: 35 mL Manual Protocol with ZymoBIOMICS® MagBead DNA/RNA Kit

New England BioLabs
MANUAL

APP-042: Manual Nanotrap A Particles: 10 mL Enviro Water Protocol Using Monarch Spin RNA Isolation Kit (Mini)

APP-133: Nanotrap Microbiome Particles, Combined: 10 mL Manual Enviro Water Protocol with Monarch Spin RNA Isolation Kit (Mini)

APP-134: Nanotrap Microbiome B Particles: 10 mL Manual Enviro Water Protocol with Monarch Spin RNA Isolation Kit (Mini)

APP-135: Nanotrap Microbiome A Particles: 35 mL Manual Enviro Water Protocol using Monarch Spin RNA Isolation Kit (Mini)

APP-136: Nanotrap Microbiome B Particles: 35 mL Manual Enviro Water Protocol with Monarch Spin RNA Isolation Kit (Mini)

APP-137: Nanotrap Microbiome Particles, Combined: 35 mL Manual Nanotrap Enviro Water Protocol with Monarch Spin RNA Isolation Kit (Mini)

Direct Extraction

APP-043: RNA Extraction from Clinical Swab Samples

Protocols by Extraction Kit - ThermoFisher
Protocols by Extraction Kit - MACHERY-NAGEL
Protocols by Extraction Kit - QIAGEN
Protocols by Extraction Kit - Promega
Protocols by Extraction Kit - IDEXX
Protocols by Extraction Kit - ZymoBIOMICS
Protocols by Direct Extraction

APP-035: Automated Nanotrap® Wastewater Protocol using QIAGEN MagAttract® Viral RNA Kit

APP-037: Automated Nanotrap Wastewater Protocol using Promega Maxwell® HT Environmental TNA Kit

APP-039: Automated Nanotrap Wastewater Protocol using IDEXX Water DNA/RNA Magnetic Bead Kit

APP-041: Automated Nanotrap Wastewater Protocol using ZymoBIOMICS® MagBead DNA/RNA Kit

APP-074: Automated Nanotrap Microbiome B Particles: Enviro Water Protocol using NucleoMag Kit

APP-075: Automated Nanotrap Microbiome A Particles and Nanotrap Microbiome BParticles: Enviro Water Protocol using MagMAX Kit

APP-076: Nanotrap Microbiome Particles, Combined: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Apex

APP-077: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit

APP-078: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using NucleoMag Kit

APP-079: Automated Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit

APP-104: Automated Nanotrap Microbiome A Particles and Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-105: Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit 35mL Apex

APP-106: Nanotrap Microbiome B Particles: 35mL Automated Protocol with MagMAX Kit and KingFisher Apex

APP-110: Nanotrap Microbiome Particles, Combined: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-111: Nanotrap Microbiome Particles, Combined: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-112: Nanotrap Microbiome Particles, Combined: 35 mL Automated Protocol withNucleoMag® Kit and the KingFisher™ Flex

APP-113: Nanotrap Microbiome A Particles: 10 mL Automated Protocol using NucleoMag® Kit and the KingFisher™ Flex

APP-114: Nanotrap Microbiome A Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-115: Nanotrap Microbiome B Particles: 10 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-116: Nanotrap Microbiome B Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Apex

APP-117: Nanotrap Microbiome B Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-118: Nanotrap Microbiome A Particles: 35 mL Automated Protocol with NucleoMag® Kit and the KingFisher™ Flex

APP-169: Continuous Automated Nanotrap Microbiome A Particles: Enviro Water Protocol using MagMAX Kit_10 mL_Apex

APP-170: Continuous Automated Nanotrap Microbiome B Particles: Enviro Water Protocol using MagMAX Kit_10 mL_Apex

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